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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886781.1_cds_XP_016440932.1_36344
CDS Infomation

[gene=LOC107766637] [db_xref=GeneID:107766637] [protein=casparian strip membrane protein 1] [protein_id=XP_016440932.1] [location=complement(join(8724..8942,9732..9855,9970..10256))] [gbkey=CDS]
Sequence

ATGGAGAAAAGTGAGTCAACCAAGATTGATGTAGTGGAAACCAACAAAGAAAGGAAAGGA
AAAGCTCCACTTTTGGGAAAAGCTCCTGTGGTTGCTGCTGCTGTTGTACATGCAAAGGGA
GGAGGTGCCAAGAGAGGCATTGCAATTTTTGACCTTATTTTAAGAATTGCAGCTTTTGCT
TCTGCATTAGGTGCAGCTGTTGCTATGGCAACCACTGAAGAAACTCTTCCTTTCTTCACA
CAATTCTTTCAATTCGAAGCCAGTTACGACGATCTTCCAACTTTTACGTTTTTTGTGGTA
GCAATGGCAATAGTTGTTGCCTACCTTGTCCTCTCTGTGCCCTTCTCTATAGTGTGCATT
GTACGCCCCCATGCAGTTGTACCTCGGCTGCTCCTCATTATCTTTGACACGGTTATTATT
GCATTGACAACGGGAGCAGCAGGGTCTTCAGCAGCCATAGTGTACTTGGCTCACAATGGA
AACCAAGATGCAAATTGGCTAGCAATCTGCCAACAATTTGGTGATTTTTGCCAAAGGGTC
AGTGGAGCTGTGGTGGCTGCCTTTGTCACTGTGGTCATCTTGATCTTCTTGGTCGTTCTA
TCTGCTTCCGCTCTTCGAAGACACCACTAA

Peptide Sequence

PEP ID

XP_016440932.1
PEP Infomation

PREDICTED: casparian strip membrane protein 1 [Nicotiana tabacum]
Sequence

MEKSESTKIDVVETNKERKGKAPLLGKAPVVAAAVVHAKGGGAKRGIAIFDLILRIAAFA
SALGAAVAMATTEETLPFFTQFFQFEASYDDLPTFTFFVVAMAIVVAYLVLSVPFSIVCI
VRPHAVVPRLLLIIFDTVIIALTTGAAGSSAAIVYLAHNGNQDANWLAICQQFGDFCQRV
SGAVVAAFVTVVILIFLVVLSASALRRHH

Transcript Sequence

Gene sequence data has not been registered.